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Debian spices up APT package manager with a dash of color
(www.theregister.com)
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It'll be fun filtering all the color codes out of build logs, that's for sure. :/
Apt even warns you to not use it for anything scripting related, apt-get has a stable interface for exactly that
So far almost any Linux software I have used and supports colored output automatically turns off coloring if it detects that stdout is not a terminal.